community/R: move from testing

2 files changed, 109 insertions, 0 deletions

diff --git a/community/R/APKBUILD b/community/R/APKBUILD
new file mode 100644
index 0000000000..5111999115
--- /dev/null
+++ b/community/R/APKBUILD
@@ -0,0 +1,101 @@
+# Contributor: Nirosan <pnirosan@gmail.com>
+# Contributor: Jakub Jirutka <jakub@jirutka.cz>
+# Maintainer: Jakub Jirutka <jakub@jirutka.cz>
+pkgname=R
+pkgver=3.3.1
+pkgrel=2
+pkgdesc="Language and environment for statistical computing"
+url="https://www.r-project.org"
+# openjdk8-jre-base is currently built only for x86*
+arch="x86_64 x86"
+license="GPL-2 GPL-3 LGPL-2.1"
+depends="$pkgname-mathlib"
+depends_dev="gcc gfortran icu-dev libjpeg-turbo libpng-dev make openblas-dev
+	pcre-dev>=8.10 readline-dev xz-dev zlib-dev
+	"
+makedepends="$depends_dev bzip2-dev cairo-dev curl-dev>=7.28 libxmu-dev
+	openjdk8-jre-base pango-dev perl tiff-dev tk-dev
+	"
+install="$pkgname.post-install"
+subpackages="$pkgname-mathlib $pkgname-dev $pkgname-doc"
+source="https://cran.r-project.org/src/base/R-${pkgver%%.*}/$pkgname-$pkgver.tar.gz"
+builddir="$srcdir/$pkgname-$pkgver"
+
+_rhome="usr/lib/R"
+ldpath="/$_rhome/lib"
+
+build() {
+	cd "$builddir"
+
+	# CXXFLAGS is propagated to /etc/R/Makeconf that is read when building
+	# additional R modules. -D__MUSL__ is needed for some modules like Rcpp.
+	# htps://github.com/RcppCore/Rcpp/issues/448
+	CXXFLAGS="$CXXFLAGS -D__MUSL__" ./configure \
+		--prefix=/usr \
+		--sysconfdir=/etc/R \
+		--localstatedir=/var \
+		--mandir=/usr/share/man \
+		--libdir=/usr/lib \
+		rdocdir=/usr/share/doc/R \
+		rincludedir=/usr/include/R \
+		rsharedir=/usr/share/R \
+		--disable-nls \
+		--enable-R-shlib \
+		--enable-java \
+		--without-recommended-packages \
+		--with-blas=openblas \
+		--with-cairo \
+		--with-ICU \
+		--with-jpeglib \
+		--with-lapack \
+		--with-libpng \
+		--with-libtiff \
+		--with-tcltk \
+		--with-x \
+		|| return 1
+
+	make || return 1
+	make -C src/nmath/standalone
+}
+
+package() {
+	local destdir="$pkgdir/$_rhome"
+
+	cd "$builddir"
+
+	make DESTDIR="$pkgdir" install || return 1
+
+	# Install libRmath.so.
+	cd src/nmath/standalone
+	make DESTDIR="$pkgdir" install || return 1
+	cd -
+
+	# Fixup R wrapper script (taken from Arch).
+	rm "$destdir"/bin/R
+	ln -sf /usr/bin/R "$destdir"/bin/R
+
+	# Remove some useless files (COPYING is duplicated, it will be
+	# in -doc, don't worry).
+	rm "$destdir"/COPYING "$destdir"/SVN-REVISION
+
+	mkdir -p "$pkgdir"/etc/R
+
+	# R apparently ignores --sysconfdir, so we must manually move configs
+	# to /etc/R and make symlinks.
+	cd "$destdir"/etc || return 1
+	local f; for f in *; do
+		mv "$f" "$pkgdir"/etc/R/ && ln -sf /etc/R/$f $f || return 1
+	done
+	cd -
+}
+
+mathlib() {
+	pkgdesc="Standalone math library from the R project"
+
+	mkdir -p "$subpkgdir"/usr/lib
+	mv "$pkgdir"/usr/lib/libRmath.so* "$subpkgdir"/usr/lib
+}
+
+md5sums="f50a659738b73036e2f5635adbd229c5  R-3.3.1.tar.gz"
+sha256sums="3dc59ae5831f5380f83c169bac2103ad052efe0ecec4ffa74bde4d85a0fda9e2  R-3.3.1.tar.gz"
+sha512sums="d0ff85e99b9ec9cac672aa30d7d1a854778c6a610bcc5336e8c60c8c74f20856f2bfeae085af793fad646ff45cb4677d9d6dcbaa18212591f72f00a02339f4cd  R-3.3.1.tar.gz"
diff --git a/community/R/R.post-install b/community/R/R.post-install
new file mode 100644
index 0000000000..f4603051e1
--- /dev/null
+++ b/community/R/R.post-install
@@ -0,0 +1,8 @@
+#!/bin/sh
+
+cat <<EOF
+*
+* If you want to install R packages from CRAN that contains native extensions,
+* then you must also install R-dev.
+*
+EOF