aboutsummaryrefslogtreecommitdiffstats
diff options
context:
space:
mode:
-rw-r--r--testing/R/APKBUILD123
1 files changed, 95 insertions, 28 deletions
diff --git a/testing/R/APKBUILD b/testing/R/APKBUILD
index d26ab0c496..7bbb2fd351 100644
--- a/testing/R/APKBUILD
+++ b/testing/R/APKBUILD
@@ -1,47 +1,114 @@
# Contributor: Nirosan <pnirosan@gmail.com>
-# Maintainer: Nirosan <pnirosan@gmail.com>
+# Contributor: Jakub Jirutka <jakub@jirutka.cz>
+# Maintainer: Jakub Jirutka <jakub@jirutka.cz>
pkgname=R
pkgver=3.3.0
-pkgrel=0
-pkgdesc="R-3.2.4 project for Statistical Computing"
+pkgrel=1
+pkgdesc="Language and environment for statistical computing"
url="https://www.r-project.org"
-arch="all"
-license="MIT"
-depends="gfortran readline-dev xz-dev zlib-dev bzip2-dev pcre-dev curl-dev perl"
-depends_dev=""
-makedepends="$depends_dev"
-install=""
-subpackages="$pkgname-doc"
-source="https://cran.r-project.org/src/base/R-3/$pkgname-$pkgver.tar.gz"
-
-_builddir="$srcdir"/$pkgname-$pkgver
-prepare() {
- local i
- cd "$_builddir"
- for i in $source; do
- case $i in
- *.patch) msg $i; patch -p1 -i "$srcdir"/$i || return 1;;
- esac
- done
-}
+arch="x86_64 x86"
+license="GPL-2 GPL-3 LGPL-2.1"
+depends=""
+makedepends="bzip2-dev curl-dev>=7.28 gfortran lapack-dev pcre-dev>=8.10 perl
+ readline-dev xz-dev zlib-dev
+ "
+subpackages="
+ $pkgname-mathlib
+ $pkgname-mathlib-dev:mathlib_dev
+ $pkgname-dev
+ $pkgname-doc
+ "
+source="https://cran.r-project.org/src/base/R-${pkgver%%.*}/$pkgname-$pkgver.tar.gz"
+builddir="$srcdir/$pkgname-$pkgver"
+
+_rhome="usr/lib/R"
+ldpath="/$_rhome/lib"
build() {
- export LD_LIBRARY_PATH="$pkgdir"/lib64/R/lib:$LD_LIBRARY_PATH
- cd "$_builddir"
+ cd "$builddir"
+
./configure \
--prefix=/usr \
+ --sysconfdir=/etc/R \
+ --localstatedir=/var \
--mandir=/usr/share/man \
+ --libdir=/usr/lib \
+ rdocdir=/usr/share/doc/R/ \
+ rincludedir=/usr/include/R/ \
+ rsharedir=/usr/share/R/ \
+ --enable-R-shlib \
+ --disable-java \
+ --disable-nls \
+ --with-blas \
+ --with-lapack \
+ --without-tcltk \
+ --without-cairo \
+ --without-libpng \
+ --without-jpeglib \
+ --without-libtiff \
+ --without-recommended-packages \
+ --without-ICU \
--without-x \
|| return 1
make || return 1
-# make check || return 1
+
+ cd src/nmath/standalone
+ make shared
}
package() {
- cd "$_builddir"
+ local destdir="$pkgdir/$_rhome"
+
+ cd "$builddir"
+
+ make DESTDIR="$pkgdir" install || return 1
+
+ # Install libRmath.so.
+ cd src/nmath/standalone
make DESTDIR="$pkgdir" install || return 1
- ln -s "$pkgdir"/bin/R R
- ln -s "$pkgdir"/bin/Rscript Rscript
+ cd -
+
+ # Fixup R wrapper script (taken from Arch).
+ rm "$destdir"/bin/R
+ ln -sf /usr/bin/R "$destdir"/bin/R
+
+ # Remove some useless files (COPYING is duplicated, it will be
+ # in -doc, don't worry).
+ rm "$destdir"/etc/javaconf "$destdir"/COPYING "$destdir"/SVN-REVISION
+
+ mkdir -p "$pkgdir"/etc/R
+
+ # R apparently ignores --sysconfdir, so we must manually move configs
+ # to /etc/R and make symlinks.
+ cd "$destdir"/etc || return 1
+ local f; for f in *; do
+ mv "$f" "$pkgdir"/etc/R/ && ln -sf /etc/R/$f $f || return 1
+ done
+ cd -
+
+ # Some R packages needs that...
+ mkdir -p "$pkgdir"/etc/profile.d
+ cat > "$pkgdir"/etc/profile.d/$pkgname.sh <<-EOF
+ export R_HOME="$_rhome"
+ EOF
+}
+
+mathlib() {
+ pkgdesc="$pkgdesc (libRmath)"
+
+ install -D "$pkgdir"/usr/lib/libRmath.so \
+ "$subpkgdir"/usr/lib/libRmath.so
+}
+
+mathlib_dev() {
+ pkgdesc="$pkgdesc (libRmath, development files)"
+ depends="$pkgname-mathlib"
+
+ local path
+ for path in usr/lib/libRmath.so usr/lib/pkgconfig/libRmath.pc; do
+ mkdir -p "$subpkgdir"/$(dirname $path)
+ mv "$pkgdir"/$path "$subpkgdir"/$path || return 1
+ done
}
md5sums="5a7506c8813432d1621c9725e86baf7a R-3.3.0.tar.gz"