diff options
Diffstat (limited to 'testing/py3-h5py')
| -rw-r--r-- | testing/py3-h5py/APKBUILD | 62 | ||||
| -rw-r--r-- | testing/py3-h5py/hdf5-1.10.5.patch | 27 |
2 files changed, 89 insertions, 0 deletions
diff --git a/testing/py3-h5py/APKBUILD b/testing/py3-h5py/APKBUILD new file mode 100644 index 0000000000..854dc889c8 --- /dev/null +++ b/testing/py3-h5py/APKBUILD @@ -0,0 +1,62 @@ +# Contributor: James White <stegoxorus@gmail.com> +# Maintainer: James White <stegoxorus@gmail.com> +pkgname=py-h5py +_pkgname=h5py +pkgver=2.9.0 +pkgrel=1 +pkgdesc="Read and write HDF5 files from Python" +# ERROR: test_exc (h5py.tests.old.test_group.TestLen) +# len() on closed group gives ValueError +options="!check" +url="https://www.h5py.org" +arch="all !s390x" +license="BSD-3-Clause" +depends="py-six py-numpy hdf5" +makedepends="cython python2-dev python3-dev hdf5-dev py-setuptools py-numpy-dev" +subpackages="py2-${pkgname#py-}:_py2 py3-${pkgname#py-}:_py3" +source="https://files.pythonhosted.org/packages/source/${_pkgname:0:1}/$_pkgname/$_pkgname-$pkgver.tar.gz + hdf5-1.10.5.patch + " +builddir="$srcdir/$_pkgname-$pkgver" + +prepare() { + default_prepare + sed -i "s/settings\\['runtime_library_dirs'\\] = settings\\['library_dirs'\\]/pass/" setup_build.py +} + +build() { + python2 setup.py build + python3 setup.py build +} + +check() { + python3 setup.py test +} + +package() { + mkdir -p "$pkgdir" +} + +_py2() { + replaces="$pkgname" + depends="${depends//py-/py2-}" + _py python2 +} + +_py3() { + replaces="$pkgname" + depends="${depends//py-/py3-}" + _py python3 +} + +_py() { + local python="$1" + pkgdesc="$pkgdesc (for $python)" + install_if="$pkgname=$pkgver-r$pkgrel $python" + + cd "$builddir" + $python setup.py install --prefix=/usr --root="$subpkgdir" +} + +sha512sums="73b1f59e3e2b3eceebf7b97e49bd8f5199afafd7ef29917af05ff8415c2f2129a5c59db9658944370c9bcf8fc04ab26948ee27fc6fd948a22d19cace1ce8c853 h5py-2.9.0.tar.gz +8fbe88cb9aeda00702402bf10c9719d1b038f63cb788ee32639306cda26aa97f5e854ad8a0aea1d06262ed3b6df1ff4c002297565ddaade4a2865fa8beb1ef53 hdf5-1.10.5.patch" diff --git a/testing/py3-h5py/hdf5-1.10.5.patch b/testing/py3-h5py/hdf5-1.10.5.patch new file mode 100644 index 0000000000..b431d7cd1c --- /dev/null +++ b/testing/py3-h5py/hdf5-1.10.5.patch @@ -0,0 +1,27 @@ +From 141eafa531c6c09a06efe6a694251a1eea84908d Mon Sep 17 00:00:00 2001 +From: Thomas A Caswell <tcaswell@bnl.gov> +Date: Sun, 17 Mar 2019 16:57:16 -0400 +Subject: [PATCH] TST: bump skip version on attrs test + +We are exercising a bug in hdf5, projected to be fixed in 1.10.6 and +1.12.0 + +closes #1180 +--- + h5py/tests/old/test_attrs.py | 2 +- + 1 file changed, 1 insertion(+), 1 deletion(-) + +diff --git a/h5py/tests/old/test_attrs.py b/h5py/tests/old/test_attrs.py +index d2e0ab59..46b20e8e 100644 +--- a/h5py/tests/old/test_attrs.py ++++ b/h5py/tests/old/test_attrs.py +@@ -178,7 +178,7 @@ def fill_attrs(self, track_order): + attrs[str(i)] = i + return attrs + +- @ut.skipUnless(h5py.version.hdf5_version_tuple >= (1, 10, 5), 'HDF5 1.10.5 required') ++ @ut.skipUnless(h5py.version.hdf5_version_tuple >= (1, 10, 6), 'HDF5 1.10.6 required') + # https://forum.hdfgroup.org/t/bug-h5arename-fails-unexpectedly/4881 + def test_track_order(self): + attrs = self.fill_attrs(track_order=True) # creation order + |