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# Contributor: Nirosan <pnirosan@gmail.com>
# Contributor: Jakub Jirutka <jakub@jirutka.cz>
# Maintainer: Jakub Jirutka <jakub@jirutka.cz>
pkgname=R
pkgver=3.4.2
pkgrel=0
pkgdesc="Language and environment for statistical computing"
url="https://www.r-project.org"
arch="all !s390x"
license="GPL-2 GPL-3 LGPL-2.1"
depends="$pkgname-mathlib"
depends_dev="gcc gfortran icu-dev libjpeg-turbo libpng-dev make openblas-dev
pcre-dev>=8.10 readline-dev xz-dev zlib-dev bzip2-dev curl-dev>=7.28
"
makedepends="$depends_dev cairo-dev libxmu-dev openjdk8-jre-base pango-dev
perl tiff-dev tk-dev
"
install="$pkgname.post-install"
subpackages="$pkgname-mathlib $pkgname-dev $pkgname-doc"
source="https://cran.r-project.org/src/base/R-${pkgver%%.*}/$pkgname-$pkgver.tar.gz"
builddir="$srcdir/$pkgname-$pkgver"
_rhome="usr/lib/R"
ldpath="/$_rhome/lib"
build() {
cd "$builddir"
# CXXFLAGS is propagated to /etc/R/Makeconf that is read when building
# additional R modules. -D__MUSL__ is needed for some modules like Rcpp.
# htps://github.com/RcppCore/Rcpp/issues/448
CXXFLAGS="$CXXFLAGS -D__MUSL__" ./configure \
--prefix=/usr \
--sysconfdir=/etc/R \
--localstatedir=/var \
--mandir=/usr/share/man \
--libdir=/usr/lib \
rdocdir=/usr/share/doc/R \
rincludedir=/usr/include/R \
rsharedir=/usr/share/R \
--disable-nls \
--enable-R-shlib \
--enable-java \
--without-recommended-packages \
--with-blas=openblas \
--with-cairo \
--with-ICU \
--with-jpeglib \
--with-lapack \
--with-libpng \
--with-libtiff \
--with-tcltk \
--with-x
make
make -C src/nmath/standalone
}
# TODO: Run provided test suite.
check() {
cd "$builddir"
./bin/R --version
./bin/R --slave --vanilla -e 'print("Hello, world!")'
}
package() {
local destdir="$pkgdir/$_rhome"
cd "$builddir"
make DESTDIR="$pkgdir" install
# Install libRmath.so.
cd src/nmath/standalone
make DESTDIR="$pkgdir" install
cd -
# Fixup R wrapper script (taken from Arch).
rm "$destdir"/bin/R
ln -sf /usr/bin/R "$destdir"/bin/R
# Remove some useless files (COPYING is duplicated, it will be
# in -doc, don't worry).
rm "$destdir"/COPYING "$destdir"/SVN-REVISION
mkdir -p "$pkgdir"/etc/R
# R apparently ignores --sysconfdir, so we must manually move configs
# to /etc/R and make symlinks.
cd "$destdir"/etc
local f; for f in *; do
mv "$f" "$pkgdir"/etc/R/ && ln -sf /etc/R/$f $f
done
cd -
}
mathlib() {
pkgdesc="Standalone math library from the R project"
mkdir -p "$subpkgdir"/usr/lib
mv "$pkgdir"/usr/lib/libRmath.so* "$subpkgdir"/usr/lib
}
sha512sums="d432b65aad8d8ed41a8470365c4d354b83a0e1228413963420f753aead8b84596c9ca3efc58506c8797e887af9dd6fdaf833ac1ad9339ac1ffb4b5aed577803d R-3.4.2.tar.gz"
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